Compare Friction Outputs

by davidjiyangcai

skill

Compare friction pipeline outputs across different runs, thinking levels, or seeds. Use when comparing visa research results, checking variance across thinking levels (minimal/low/medium), analyzing fee discrepancies, or reviewing route selection consistency.

Skill Details

Repository Files

1 file in this skill directory


name: compare-friction-outputs description: Compare friction pipeline outputs across different runs, thinking levels, or seeds. Use when comparing visa research results, checking variance across thinking levels (minimal/low/medium), analyzing fee discrepancies, or reviewing route selection consistency. allowed-tools: Read, Glob, Grep, Bash

Compare Friction Pipeline Outputs

Compare outputs from the orig_dest_occ_friction pipeline across different runs to analyze variance and consistency.

When to Use

  • Comparing results across thinking levels (minimal, low, medium)
  • Checking if route selections are consistent
  • Investigating field value variance (fees, salaries, processing days)
  • Verifying synthesis decisions

Key File Locations

src/orig_dest_occ_friction/
├── artifacts_v8_minimal/
│   └── [triple]/
│       ├── output.json          # FINAL extracted values (use this!)
│       ├── panel.csv            # Yearly panel expansion
│       └── workspace/
│           ├── research.md      # Full research with worker synthesis
│           ├── todos.json       # Field completion status
│           └── year_routes.json # Route selection
├── artifacts_v8_low/
└── artifacts_v8_medium/

Comparison Workflow

1. Find artifact directories

ls -d src/orig_dest_occ_friction/artifacts_*

2. Find common triples

ls src/orig_dest_occ_friction/artifacts_v8_minimal/

3. Compare route selections

For each triple, extract first route from output.jsonyear_routes.

4. Compare field values

Key fields to compare:

  • application_fee_applicant - Total mandatory fees
  • salary_min - Minimum salary threshold
  • representative_days - Processing time
  • pr_years_required - Years to permanent residency
  • job_loss_grace_period_days - Grace period after job loss

5. Use the comparison script

uv run python scripts/compare_friction_outputs.py artifacts_v8_minimal artifacts_v8_low artifacts_v8_medium

Understanding research.md Structure

The workspace/research.md file has multiple sections:

  1. Worker Reports (top) - 3 parallel workers with potentially different findings
  2. Step 1: Decisions - Synthesis rationale explaining which worker was chosen
  3. Step 2: Search Queries/Results - Verification searches
  4. Step 3: Final Synthesis - THE ACTUAL OUTPUT VALUES (matches output.json)

IMPORTANT: Always compare using output.json or "Step 3: Final Synthesis", NOT the individual worker reports at the top of research.md.

Investigating Variance

When values differ across runs:

  1. Read the full research.md for each run
  2. Check "Step 1: Decisions" for the rationale
  3. Look for which worker was selected and why
  4. Check if the variance is due to:
    • Different fee components included
    • Historical data interpretation differences
    • Source availability differences

Output Format

=== ROUTE SELECTIONS ===
Triple                    minimal              low                  medium
australia_china_2211      Subclass 457         Subclass 457         Subclass 457

=== FIELD COMPARISON ===
australia_china_2211:
  ⚠️ application_fee_applicant:  (⚠️ = values differ)
      minimal: 765
      low: 265
      medium: 615
     salary_min:                  (no marker = consistent)
      minimal: 47480
      low: 47480
      medium: 47480

Related Skills

Attack Tree Construction

Build comprehensive attack trees to visualize threat paths. Use when mapping attack scenarios, identifying defense gaps, or communicating security risks to stakeholders.

skill

Grafana Dashboards

Create and manage production Grafana dashboards for real-time visualization of system and application metrics. Use when building monitoring dashboards, visualizing metrics, or creating operational observability interfaces.

skill

Matplotlib

Foundational plotting library. Create line plots, scatter, bar, histograms, heatmaps, 3D, subplots, export PNG/PDF/SVG, for scientific visualization and publication figures.

skill

Scientific Visualization

Create publication figures with matplotlib/seaborn/plotly. Multi-panel layouts, error bars, significance markers, colorblind-safe, export PDF/EPS/TIFF, for journal-ready scientific plots.

skill

Seaborn

Statistical visualization. Scatter, box, violin, heatmaps, pair plots, regression, correlation matrices, KDE, faceted plots, for exploratory analysis and publication figures.

skill

Shap

Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP plots (waterfall, beeswarm, bar, scatter, force, heatmap), debugging models, analyzing model bias or fairness, comparing models, or implementing explainable AI. Works with tree-based models (XGBoost, LightGBM, Random Forest), deep learning (TensorFlow, PyTorch), linear models, and any black-box model

skill

Pydeseq2

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

skill

Query Writing

For writing and executing SQL queries - from simple single-table queries to complex multi-table JOINs and aggregations

skill

Pydeseq2

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

skill

Scientific Visualization

Meta-skill for publication-ready figures. Use when creating journal submission figures requiring multi-panel layouts, significance annotations, error bars, colorblind-safe palettes, and specific journal formatting (Nature, Science, Cell). Orchestrates matplotlib/seaborn/plotly with publication styles. For quick exploration use seaborn or plotly directly.

skill

Skill Information

Category:Skill
Allowed Tools:Read, Glob, Grep, Bash
Last Updated:1/12/2026